Logo2PWM: a tool to convert sequence logo to position weight matrix
نویسندگان
چکیده
منابع مشابه
On counting position weight matrix matches in a sequence, with application to discriminative motif finding
MOTIVATION AND RESULTS The position weight matrix (PWM) is a popular method to model transcription factor binding sites. A fundamental problem in cis-regulatory analysis is to "count" the occurrences of a PWM in a DNA sequence. We propose a novel probabilistic score to solve this problem of counting PWM occurrences. The proposed score has two important properties: (1) It gives appropriate weigh...
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ژورنال
عنوان ژورنال: BMC Genomics
سال: 2017
ISSN: 1471-2164
DOI: 10.1186/s12864-017-4023-9